Hi Mike,
I can see how both of those are annoying.
I can easily remove the "ok" prompt for the "Link to AutoCal" option. The prompt is not needed because it is trivial to remove the link if/when that option is selected by mistake.
Changing the connection to FlashScan should be done silently in the background, and if a connection to an AutoCal was already established that conenction should be automatically restored - I'll put that on the to-do list.
Regards
Paul