Sorry, forgot to ask, stock TB? The key part of your last comment, "adjusted throttle stop down to .5v" This does not make sense to me. When you move the screw the voltage IS going to change. TPS reset, or relearn or whatever, IS the process where the pcm gets it's NEW electro-mechanical "ZERO."
Try this, physically remove the TPS sensor from the TB. With KOEO, observe the TPS voltage while cycling the TPS with your finger 0-100% Your TPS should have a spring inside that helps pull back the wiper to zero position. An old or worn out spring or the plastic not fitting snug enough on the shaft of the TB will produce the phenom of an inconsistent zero. If zero position displays ~+/- .6v don't worry about it.
Bear in mind, the first time pwr/grnd & KOEO the pcm will "record/remember" the physical/mechanical position of the TB shaft as it will produce the voltage output of the TPS sensor displayed on your scan tool.
Sometimes the TPS reset procedure can be a PITA. That is forcing a failure of the TPS.
Big picture, increasing the position of the set screw will (or drilling the TB, not my favorite in 2019) will provide more bypass air to achieve your target idle. The pcm will not "need," the IAC counts. The IAC counts will go down on their own.
2019
Holley LS Throttle Bodies 112-581
A little late to the party but, Holley had some really great ideas with these TBs. Notice the adj bypass air screw on the pass side? You can turn that sucker as much as you want, no TPS reset. On the driver's side, the TPS position is adjustable, so you can get your electrical zero nailed down as well. The adj TPS is really handy on big cam / heads. These TBs are not cheap but, they make things a lot more fun. There are two styles. I would recommend the tapered lip for a street car. The hogged out to the max non lip, I would use on a track only car where you want / need max airflow and don't care about street manners.